STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41788.1Metallophosphoesterase. (265 aa)    
Predicted Functional Partners:
EFL41789.1
Cyclase/dehydrase.
 
     0.795
EFL41790.1
Conserved hypothetical protein.
 
     0.747
EFL41791.1
Conserved hypothetical protein.
       0.689
EFL38004.1
Conserved hypothetical protein.
  
     0.670
EFL41792.1
Glucokinase.
       0.655
EFL41816.1
Membrane protein.
      
 0.654
EFL41793.1
Endonuclease/exonuclease/phosphatase.
       0.632
EFL41285.1
Heavy metal-associated domain-containing protein.
     
 0.627
EFL42695.1
Hypothetical protein.
    
  0.602
EFL40524.1
Aminoglycoside phosphotransferase.
  
     0.571
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.