STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41802.1Conserved hypothetical protein. (78 aa)    
Predicted Functional Partners:
EFL37975.1
Formate dehydrogenase, beta subunit.
   
 0.950
EFL37793.1
Secreted protein.
  
 0.934
EFL41772.1
Cytochrome C heme-binding subunit.
  
 0.934
EFL41895.1
Glutamate synthase large subunit.
  
 
 0.899
EFL41803.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.891
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
 0.871
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
 0.871
EFL38300.1
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.858
EFL38530.1
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.858
EFL39612.1
Integral membrane protein.
  
 
 0.851
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.