Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL41826.1Magnesium chelatase, subunit ChII family protein. (327 aa)    
Predicted Functional Partners:
EFL41824.1
Membrane protein; Overlaps another CDS with the same product name.
 
   
 0.963
EFL41825.1
Membrane protein; Overlaps another CDS with the same product name.
 
  
 0.947
EFL41827.1
Carbonate dehydratase.
  
    0.722
EFL42076.1
Magnesium chelatase.
  
 
 0.595
EFL41038.1
Lipoprotein.
 
  
 0.557
EFL41832.1
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase.
  
    0.555
rsmH
Methylase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.552
EFL41829.1
Membrane protein.
       0.552
EFL41830.1
Penicillin-binding protein 3.
       0.552
EFL41831.1
UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Belongs to the MurCDEF family. MurE subfamily.
       0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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