STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41830.1Penicillin-binding protein 3. (652 aa)    
Predicted Functional Partners:
EFL41829.1
Membrane protein.
  
 
 0.986
EFL41831.1
UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Belongs to the MurCDEF family. MurE subfamily.
  
 0.967
EFL41374.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
 0.948
EFL40399.1
Penicillin-binding protein.
  
 
 0.946
EFL41157.1
Penicillin-binding protein 1.
  
 
 0.942
EFL40353.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.941
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.938
EFL41835.1
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.920
EFL39152.1
Cell division protein FtsW; Belongs to the SEDS family.
 0.918
EFL40305.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.917
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.