STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41856.1Membrane protein. (279 aa)    
Predicted Functional Partners:
EFL41858.1
Conserved hypothetical protein.
 
     0.729
EFL41857.1
Membrane protein.
       0.725
EFL41859.1
DNA polymerase III, alpha subunit.
       0.657
EFL39035.1
Membrane protein.
  
     0.560
EFL39481.1
Membrane protein.
 
     0.560
EFL41829.1
Membrane protein.
  
     0.549
EFL41403.1
Membrane protein.
  
     0.542
EFL39969.1
Alanine-rich protein.
  
    0.538
EFL40210.1
Conserved hypothetical protein.
  
     0.537
EFL41855.1
Alkaline phosphatase.
       0.533
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.