Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41860.1Conserved hypothetical protein. (184 aa)    
Predicted Functional Partners:
EFL37835.1
Transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.692
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.685
EFL41862.1
ABC transporter ATP-binding protein.
       0.678
EFL41863.1
ABC-2 type transporter.
       0.660
EFL41548.1
Conserved hypothetical protein.
  
     0.656
EFL41864.1
Membrane protein.
       0.649
EFL41674.1
Conserved hypothetical protein.
  
     0.642
EFL40210.1
Conserved hypothetical protein.
  
     0.588
EFL41291.1
Conserved hypothetical protein.
  
     0.572
EFL41229.1
Conserved hypothetical protein.
  
     0.570
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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