Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL41862.1ABC transporter ATP-binding protein. (339 aa)    
Predicted Functional Partners:
EFL41863.1
ABC-2 type transporter.
 
 
  0.948
EFL41864.1
Membrane protein.
 
     0.813
EFL41688.1
ABC-transporter, transmembrane component.
  
 
 0.793
EFL37365.1
Daunorubicin resistance transmembrane protein.
  
 
 0.773
EFL39474.1
ABC transporter, permease component.
  
 
 0.748
EFL41658.1
Multidrug ABC transporter permease.
  
 
 0.742
EFL40015.1
ABC-2 type transporter.
  
 
 0.720
EFL42192.1
ABC transporter, permease component.
  
 
 0.702
EFL39896.1
ABC transporter, permease.
 
 
 0.700
EFL40316.1
Daunorubicin resistance transmembrane protein.
  
  
  0.680
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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