STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41882.1Membrane protein. (87 aa)    
Predicted Functional Partners:
EFL41883.1
Membrane protein.
       0.802
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.728
EFL40327.1
Membrane protein; Overlaps another CDS with the same product name.
  
     0.702
EFL42502.1
Membrane protein.
  
     0.676
EFL41024.1
Secreted protein; Unextendable partial coding region.
  
     0.673
EFL40879.1
Membrane protein.
  
     0.671
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.665
EFL41886.1
Tryptophan synthase subunit alpha; Belongs to the TrpA family.
       0.665
EFL40326.1
Membrane protein; Overlaps another CDS with the same product name.
  
     0.662
EFL40333.1
Conserved hypothetical protein.
  
     0.659
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.