lgt protein (Streptomyces griseoflavus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

lgt

Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (338 aa)

Predicted Functional Partners:

EFL41886.1

0.980

trpB

0.969

trpC

0.833

EFL41887.1

0.800

EFL39571.1

0.781

EFL40382.1

0.775

EFL41545.1

0.758

EFL40381.1

0.718

EFL41181.1

0.718

gpsA

0.689

Your Current Organism:

Streptomyces griseoflavus

NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL39571.1	lgt	SSRG_02375	SSRG_04692	Integral membrane protein; Overlaps another CDS with the same product name; Belongs to the UbiA prenyltransferase family.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.781
EFL40381.1	EFL40382.1	SSRG_03185	SSRG_03186	Membrane protein OxaA.	R3H domain-containing protein.	0.984
EFL40381.1	EFL41181.1	SSRG_03185	SSRG_03985	Membrane protein OxaA.	Preprotein translocase YidC subunit.	0.878
EFL40381.1	EFL41886.1	SSRG_03185	SSRG_04690	Membrane protein OxaA.	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	0.731
EFL40381.1	lgt	SSRG_03185	SSRG_04692	Membrane protein OxaA.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.718
EFL40382.1	EFL40381.1	SSRG_03186	SSRG_03185	R3H domain-containing protein.	Membrane protein OxaA.	0.984
EFL40382.1	EFL41181.1	SSRG_03186	SSRG_03985	R3H domain-containing protein.	Preprotein translocase YidC subunit.	0.798
EFL40382.1	EFL41886.1	SSRG_03186	SSRG_04690	R3H domain-containing protein.	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	0.772
EFL40382.1	lgt	SSRG_03186	SSRG_04692	R3H domain-containing protein.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.775
EFL41181.1	EFL40381.1	SSRG_03985	SSRG_03185	Preprotein translocase YidC subunit.	Membrane protein OxaA.	0.878
EFL41181.1	EFL40382.1	SSRG_03985	SSRG_03186	Preprotein translocase YidC subunit.	R3H domain-containing protein.	0.798
EFL41181.1	EFL41886.1	SSRG_03985	SSRG_04690	Preprotein translocase YidC subunit.	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	0.731
EFL41181.1	lgt	SSRG_03985	SSRG_04692	Preprotein translocase YidC subunit.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.718
EFL41545.1	lgt	SSRG_04349	SSRG_04692	Beta-lactamase.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.758
EFL41886.1	EFL40381.1	SSRG_04690	SSRG_03185	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	Membrane protein OxaA.	0.731
EFL41886.1	EFL40382.1	SSRG_04690	SSRG_03186	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	R3H domain-containing protein.	0.772
EFL41886.1	EFL41181.1	SSRG_04690	SSRG_03985	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	Preprotein translocase YidC subunit.	0.731
EFL41886.1	EFL41887.1	SSRG_04690	SSRG_04691	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	Membrane protein.	0.552
EFL41886.1	lgt	SSRG_04690	SSRG_04692	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.980
EFL41886.1	trpB	SSRG_04690	SSRG_04689	Tryptophan synthase subunit alpha; Belongs to the TrpA family.	Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.999

page 1 of 3

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About