STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41889.1Citrate lyase subunit beta. (122 aa)    
Predicted Functional Partners:
EFL38041.1
Citrate (Pro-3S)-lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
  
  0.985
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.842
EFL38042.1
MaoC domain-containing protein.
 
 
 0.773
EFL41892.1
Conserved hypothetical protein.
 
     0.754
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.742
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.742
EFL43386.1
MaoC domain-containing protein.
 
 
 0.734
EFL38155.1
Malate synthase A; Belongs to the malate synthase family.
    
 0.732
EFL42060.1
Aspartate aminotransferase.
    
 0.731
EFL41891.1
ADP-ribosylglycohydrolase superfamily protein.
 
     0.728
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.