Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41893.1Secreted protein. (370 aa)    
Predicted Functional Partners:
EFL41892.1
Conserved hypothetical protein.
 
     0.893
EFL41891.1
ADP-ribosylglycohydrolase superfamily protein.
 
    
0.681
EFL41889.1
Citrate lyase subunit beta.
 
     0.657
EFL40125.1
Conserved hypothetical protein.
  
     0.634
EFL42307.1
Transcriptional regulator.
  
     0.627
EFL40473.1
Conserved hypothetical protein.
  
     0.626
EFL38859.1
Nitrogen regulatory protein P-II.
    
 
 0.600
EFL39469.1
Regulatory protein.
  
     0.591
EFL37430.1
AfsR/dnrI/redD regulatory family protein.
  
     0.590
EFL38318.1
hydroxylacyl-CoA dehydrogenase.
  
     0.588
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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