STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41894.1Integral membrane protein. (170 aa)    
Predicted Functional Partners:
EFL39427.1
Conserved hypothetical protein.
      
 0.654
EFL41895.1
Glutamate synthase large subunit.
  
  
 0.633
EFL41887.1
Membrane protein.
       0.572
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.572
EFL41889.1
Citrate lyase subunit beta.
       0.572
EFL41891.1
ADP-ribosylglycohydrolase superfamily protein.
       0.572
EFL41892.1
Conserved hypothetical protein.
       0.572
EFL41893.1
Secreted protein.
       0.572
EFL41896.1
Glutamate synthase, small subunit.
       0.572
EFL40781.1
Iron-dependent repressor IdeR.
 
   
 0.468
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.