STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41897.1Chitosanase; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan. (300 aa)    
Predicted Functional Partners:
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.912
EFL38393.1
Beta-mannosidase.
     
 0.893
EFL41898.1
Rhomboid family protein.
       0.870
EFL39076.1
Chitinase 63.
 
 
 0.805
EFL41899.1
Toxic cation resistance protein; Unextendable partial coding region.
       0.775
EFL42965.1
Chitosanase-glucanase.
     
 0.699
EFL41346.1
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein.
  
  
  0.666
EFL39824.1
Integral membrane transferase.
    
 0.527
EFL39825.1
Glycosyl transferase, group 2.
    
 0.527
EFL41087.1
Glycosyl transferase, group 2.
    
 0.527
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.