STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41902.1Aminopeptidase N. (834 aa)    
Predicted Functional Partners:
EFL41747.1
Leucyl aminopeptidase; Truncated CDS; unextendable partial coding region; Belongs to the peptidase M17 family.
   
 0.895
EFL37455.1
Carboxylate-amine ligase.
    
  0.852
EFL40417.1
Cys/Met metabolism PLP-dependent enzyme.
   
 
 0.851
EFL37636.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
     
  0.850
EFL38079.1
Gamma-glutamyltransferase.
     
  0.850
EFL39733.1
Aspartate transaminase.
     
  0.850
EFL41339.1
Aminopeptidase N.
     
  0.850
EFL41348.1
Aminopeptidase N.
     
  0.850
EFL42770.1
Pyridoxal-phosphate dependent enzyme.
     
  0.850
egtA
Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low- molecular thiol compound ergothioneine.
     
  0.850
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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