STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41916.1Secreted protein. (592 aa)    
Predicted Functional Partners:
EFL41305.1
Membrane protein.
  
     0.546
EFL39945.1
Conserved hypothetical protein.
  
     0.511
EFL39192.1
N-acetylmuramoyl-L-alanine amidase.
  
   
 0.507
EFL39028.1
Hypothetical hydrophilic protein.
  
     0.479
EFL38239.1
Iron-sulfur protein.
  
     0.465
EFL39611.1
PspC domain-containing protein.
  
     0.460
EFL39481.1
Membrane protein.
  
     0.451
EFL40901.1
Penicillin-binding protein.
 
 
 
 0.439
EFL40902.1
Penicillin-binding protein.
 
 
 
 0.435
EFL41506.1
Virulence factor Mce family protein; Overlaps another CDS with the same product name.
 
     0.419
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.