STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41921.1Conserved hypothetical protein. (312 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.816
EFL41920.1
Ribosomal protein S1.
 
     0.790
EFL41923.1
Tetratricopeptide repeat-containing protein.
       0.768
EFL37427.1
Helix-turn-helix domain-containing protein.
   
    0.583
EFL37719.1
Helix-turn-helix domain-containing protein.
   
    0.583
EFL40800.1
Pyridoxamine 5-phosphate oxidase.
   
    0.583
EFL42311.1
Conserved hypothetical protein.
   
    0.583
EFL42547.1
Flavin-nucleotide-binding protein.
   
    0.583
EFL42551.1
Pyridoxamine 5'-phosphate oxidase.
   
    0.583
EFL42964.1
Helix-turn-helix domain-containing protein.
   
    0.583
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.