STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41931.1Glutathione-independent formaldehyde dehydrogenase. (377 aa)    
Predicted Functional Partners:
EFL43254.1
Alcohol dehydrogenase; Truncated CDS; unextendable partial coding region.
  
 
  0.893
EFL42225.1
Formate dehydrogenase.
     
  0.850
EFL42205.1
Alcohol dehydrogenase (zinc-binding).
  
 
 
0.835
EFL37975.1
Formate dehydrogenase, beta subunit.
    
 0.729
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.695
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.695
EFL40863.1
PTS system, fructose-specific family, IIABC component.
     
  0.694
EFL39814.1
NADH dehydrogenase I, E subunit.
     
  0.687
EFL43341.1
Aryl-alcohol dehydrogenase.
  
 
 
0.687
EFL43336.1
Benzyl-alcohol dehydrogenase.
  
 
 
0.686
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.