STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41941.1Xre family toxin-antitoxin system, antitoxin component. (286 aa)    
Predicted Functional Partners:
EFL41942.1
Toxin-antitoxin system, toxin component.
 
     0.955
EFL41943.1
Conserved hypothetical protein.
 
     0.909
EFL39033.1
Conserved hypothetical protein.
 
     0.793
EFL39715.1
Conserved hypothetical protein.
 
     0.792
EFL37499.1
Conserved hypothetical protein.
 
     0.789
EFL37918.1
Conserved hypothetical protein.
 
     0.782
EFL43109.1
Conserved hypothetical protein.
 
     0.779
EFL42940.1
Conserved hypothetical protein.
 
     0.777
EFL40021.1
Toxin-antitoxin system, toxin component.
  
     0.774
EFL43107.1
Toxin-antitoxin system, toxin component.
  
     0.774
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.