STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41947.1CBS domain-containing protein. (142 aa)    
Predicted Functional Partners:
EFL41895.1
Glutamate synthase large subunit.
    
 0.889
EFL42872.1
Proline rich protein.
   
  
 0.847
EFL41946.1
Conserved hypothetical protein.
    
  0.811
EFL39616.1
GMP synthase.
    
 0.782
EFL39617.1
GMP synthase domain-containing protein.
    
 0.782
EFL42253.1
M50 family peptidase; Belongs to the peptidase M50B family.
  
    0.720
EFL42467.1
IMP dehydrogenase.
    
 0.707
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.700
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.691
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.691
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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