STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41958.1Cation/proton antiporter. (366 aa)    
Predicted Functional Partners:
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.734
EFL41957.1
TerC family membrane protein.
     
 0.719
EFL41956.1
Export associated protein.
       0.650
EFL38992.1
Calcium-binding protein.
    
 
 0.618
EFL40793.1
Calcium binding protein.
    
 
 0.618
EFL37503.1
PE-PGRS family protein; Belongs to the V-ATPase 116 kDa subunit family.
    
   0.592
EFL38099.1
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
 
 
 0.569
EFL37509.1
Calcium-translocating P-type ATPase, PMCA-type; Truncated CDS; unextendable partial coding region.
   
 
 0.561
EFL37745.1
Calcium-translocating P-type ATPase, PMCA-type.
   
 
 0.561
EFL40739.1
E1-E2 family cation-transporting ATPase.
   
 
 0.561
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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