STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41962.1Conserved hypothetical protein. (229 aa)    
Predicted Functional Partners:
EFL43167.1
Gentisate 1,2-dioxygenase.
 
  
 0.955
EFL43168.1
Fumarylacetoacetate hydrolase domain-containing protein 2A.
    
 0.891
EFL43169.1
OmpA/MotB.
  
  
 
0.886
EFL41960.1
Metallo-beta-lactamase superfamily protein.
       0.817
EFL42911.1
Fumarylacetoacetate hydrolase.
    
 0.791
EFL41961.1
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.790
EFL42964.1
Helix-turn-helix domain-containing protein.
  
     0.559
EFL41969.1
P-loop ATPase; Displays ATPase and GTPase activities.
       0.533
EFL41970.1
Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.507
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
       0.467
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.