STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41962.1Conserved hypothetical protein. (229 aa)    
Predicted Functional Partners:
EFL43167.1
Gentisate 1,2-dioxygenase.
 
  
 0.966
EFL43169.1
OmpA/MotB.
  
  
 
0.911
EFL43168.1
Fumarylacetoacetate hydrolase domain-containing protein 2A.
    
 0.907
EFL42911.1
Fumarylacetoacetate hydrolase.
    
 0.821
EFL41960.1
Metallo-beta-lactamase superfamily protein.
       0.818
EFL41961.1
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.795
EFL42964.1
Helix-turn-helix domain-containing protein.
  
     0.559
EFL41969.1
P-loop ATPase; Displays ATPase and GTPase activities.
       0.545
EFL41970.1
Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.493
EFL37427.1
Helix-turn-helix domain-containing protein.
  
     0.453
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.