STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41982.1PadR family transcriptional regulator. (171 aa)    
Predicted Functional Partners:
EFL41980.1
Integral membrane.
 
     0.936
EFL41981.1
ABC transporter, ATP-binding protein.
 
     0.893
EFL38309.1
Secreted protein.
   
    0.722
EFL38502.1
Secreted protein.
   
    0.722
EFL41983.1
ABC sugar transporter, periplasmic substrate binding component.
 
     0.683
EFL40312.1
Conserved hypothetical protein.
       0.552
EFL41985.1
Secreted protein.
 
     0.501
EFL42295.1
Conserved hypothetical protein.
  
     0.422
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.