STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41998.1Integral membrane transporter. (349 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.999
EFL42094.1
Membrane protein.
 
 
 0.977
EFL41772.1
Cytochrome C heme-binding subunit.
 
 
 0.875
EFL41999.1
ABC-type efflux system, permease.
 
     0.865
EFL41771.1
cytoChrome c oxidase subunit III.
 
 
 0.811
EFL41774.1
ubiquinol-Cytochrome c reductase cytochrome b subunit.
 
   
 0.785
EFL41766.1
Cytochrome c oxidase, subunit II.
 
 
 0.779
EFL42000.1
ABC-type efflux protein, ATP-binding protein.
     
 0.761
EFL41773.1
Ubiquinol-cytochrome C reductase iron-sulfur subunit.
  
  
 0.751
EFL40452.1
Electron transporter SCO1/SenC.
  
 
 0.740
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (18%) [HD]