STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42001.1DNA-binding protein. (252 aa)    
Predicted Functional Partners:
EFL42002.1
FeS assembly protein SufB.
  
  
 0.983
EFL42003.1
FeS assembly protein SufD.
 
  
 0.920
EFL42005.1
FeS assembly ATPase SufC.
  
  
 0.900
EFL42007.1
NifU family SUF system FeS assembly protein.
  
  
 0.883
EFL42008.1
Aromatic ring hydroxylating enzyme.
     
 0.869
EFL41008.1
Membrane protein.
  
    0.812
EFL42006.1
SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
     
 0.801
EFL42004.1
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit.
       0.800
EFL38196.1
Transcriptional regulator.
   
    0.771
EFL37657.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
  
 0.769
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.