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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42008.1Aromatic ring hydroxylating enzyme. (110 aa)    
Predicted Functional Partners:
EFL42007.1
NifU family SUF system FeS assembly protein.
 
    0.996
EFL42005.1
FeS assembly ATPase SufC.
 
  
 0.970
EFL42003.1
FeS assembly protein SufD.
 
   
 0.962
EFL42006.1
SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.962
EFL42002.1
FeS assembly protein SufB.
 
   
 0.961
EFL42004.1
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit.
    
  0.870
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.831
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.831
EFL42001.1
DNA-binding protein.
       0.797
EFL43276.1
phenylacetate-CoA oxygenase, PaaH subunit.
  
 
 0.797
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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