Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL42020.1Stress protein. (181 aa)    
Predicted Functional Partners:
EFL41559.1
Conserved hypothetical protein.
    0.915
EFL41955.1
Tellurium resistance protein TerZ.
 
     0.893
EFL41561.1
ATP/GTP-binding protein.
 
     0.795
EFL41562.1
Conserved hypothetical protein.
 
     0.794
EFL41563.1
Conserved hypothetical protein.
 
     0.792
EFL41899.1
Toxic cation resistance protein; Unextendable partial coding region.
 
     0.776
EFL40260.1
Conserved hypothetical protein.
  
     0.774
EFL42022.1
Sugar ABC transporter permease.
       0.736
EFL42023.1
Sugar ABC transporter permease.
       0.736
EFL42024.1
Conserved hypothetical protein.
       0.736
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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