STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42028.1Integral membrane efflux protein. (393 aa)    
Predicted Functional Partners:
EFL42029.1
Conserved hypothetical protein.
       0.773
EFL37386.1
Conserved hypothetical protein.
  
     0.695
EFL41260.1
Membrane transporter.
  
     0.589
EFL42576.1
Efflux protein.
  
     0.565
EFL40629.1
Conserved hypothetical protein.
   
    0.552
EFL41355.1
Conserved hypothetical protein.
   
    0.552
EFL42030.1
Transcriptional regulator.
       0.552
EFL42031.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
       0.552
EFL37655.1
Major facilitator superfamily transporter (MFS) transporter.
  
     0.537
EFL42248.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.523
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.