STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42030.1Transcriptional regulator. (229 aa)    
Predicted Functional Partners:
EFL42031.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.889
EFL42032.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
     0.889
EFL42033.1
Integral membrane transporter; Overlaps another CDS with the same product name.
       0.777
EFL42034.1
Integral membrane transporter; Overlaps another CDS with the same product name.
       0.777
EFL42035.1
Oxidoreductase family, NAD-binding Rossmann fold domain-containing protein.
       0.777
EFL43389.1
GntR-family transcriptional regulator.
  
  
 0.771
EFL38343.1
Transcriptional regulator.
  
  
 0.768
EFL37406.1
GntR family transcriptional regulator.
  
     0.760
EFL37768.1
L-asparagine operon repressor (GntR family).
  
  
 0.753
EFL38695.1
Sporulation transcription factor, WhiH.
  
  
 0.750
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.