STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42035.1Oxidoreductase family, NAD-binding Rossmann fold domain-containing protein. (393 aa)    
Predicted Functional Partners:
EFL42757.1
Conserved hypothetical protein.
 
     0.896
EFL42033.1
Integral membrane transporter; Overlaps another CDS with the same product name.
       0.878
EFL42034.1
Integral membrane transporter; Overlaps another CDS with the same product name.
       0.878
EFL42039.1
Pectate lyase (PL); Unextendable partial coding region.
 
     0.788
EFL42030.1
Transcriptional regulator.
       0.770
EFL42031.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
       0.770
EFL42032.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.770
EFL41265.1
Sugar phosphate isomerase/epimerase.
 
 
  0.736
EFL41263.1
gfo/Idh/MocA family oxidoreductase.
  
     0.665
EFL40930.1
Galactokinase (Galactose kinase).
  
 0.649
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.