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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42049.1Fatty aldehyde dehydrogenase. (509 aa)    
Predicted Functional Partners:
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
  
 0.902
EFL37540.1
Condensation domain-containing protein.
  
 0.902
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.902
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
  
 0.889
EFL42865.1
Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
   
 
  0.879
EFL43427.1
5-dehydro-4-deoxyglucarate dehydratase (5-keto-4-deoxy-glucarate dehydratase) (KDGDH); Belongs to the DapA family.
 
 
  0.867
EFL43484.1
Polyketide synthase.
  
 0.862
EFL42027.1
5-dehydro-4-deoxyglucarate dehydratase 1 (5-keto-4-deoxy-glucarate dehydratase 1) (KDGDH 1); Belongs to the DapA family.
 
 
  0.858
EFL41895.1
Glutamate synthase large subunit.
  
 
 0.848
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
   
 0.811
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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