STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42054.1FrnE protein. (236 aa)    
Predicted Functional Partners:
EFL42053.1
Conserved hypothetical protein.
       0.781
EFL42055.1
Class V superfamily aminotransferase.
       0.771
EFL41725.1
Arsenate reductase; Belongs to the ArsC family.
    
 
 0.675
EFL41318.1
Protozoan/cyanobacterial globin family protein.
 
  
 0.669
EFL39909.1
FMN reductase.
 
    0.580
EFL40851.1
Secreted protein.
    
   0.570
EFL42807.1
FMN reductase.
 
    0.563
EFL42047.1
GNAT family acetyltransferase.
       0.552
EFL42048.1
IclR-family transcriptional regulator.
       0.552
EFL42049.1
Fatty aldehyde dehydrogenase.
       0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.