STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42072.1Membrane protein; Truncated CDS. (188 aa)    
Predicted Functional Partners:
EFL42071.1
Precorrin-4 C11-methyltransferase.
       0.783
EFL42194.1
Conserved hypothetical protein; Unextendable partial coding region.
 
     0.647
EFL42070.1
Precorrin-6y C5,15-methyltransferase, subunit CbiE.
       0.624
EFL40786.1
Conserved hypothetical protein.
  
     0.608
EFL41738.1
Conserved hypothetical protein.
  
    0.592
EFL40841.1
Superoxide dismutase.
  
  
 0.584
EFL42281.1
Siderophore-interacting FAD-binding domain-containing protein.
   
    0.564
EFL42066.1
CobC protein.
  
    0.552
EFL42067.1
Cobalamin biosynthesis CbiX protein.
       0.552
EFL42068.1
precorrin-8X methylmutase.
       0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.