Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EFL42076.1Magnesium chelatase. (201 aa)    
Predicted Functional Partners:
EFL42077.1
Cobaltochelatase, CobN subunit.
 
 0.996
EFL42075.1
cob(I)yrinic acid a,c-diamide adenosyltransferase.
 
   
 0.961
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.941
EFL38375.1
Protoporphyrinogen oxidase.
  
 
 0.927
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.919
EFL42073.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
     0.912
EFL37428.1
Flavodoxin.
     
  0.850
EFL41737.1
Oxidoreductase.
  
 
 0.838
EFL37933.1
Conserved hypothetical protein.
  
 0.829
EFL38194.1
Secreted protein; Overlaps another CDS with the same product name.
  
 0.829
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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