STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42085.1Transcriptional regulator. (88 aa)    
Predicted Functional Partners:
EFL42084.1
ABC transporter, ATP-binding protein.
  
    0.795
EFL42086.1
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.774
EFL42584.1
YbaK/prolyl-tRNA synthetase associated region.
  
   
 0.717
EFL42395.1
Sporulation and cell division protein SsgA.
  
   
 0.703
EFL40423.1
Conserved hypothetical protein.
  
     0.693
EFL37197.1
Sporulation and cell division protein SsgA.
  
     0.691
EFL42083.1
Glyoxalase.
       0.690
EFL42446.1
Helix-turn-helix domain-containing protein.
  
   
 0.689
EFL37856.1
Regulatory protein.
  
     0.623
EFL40618.1
Conserved hypothetical protein.
  
     0.526
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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