Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL42136.1Conserved hypothetical protein. (115 aa)    
Predicted Functional Partners:
EFL42137.1
Conserved hypothetical protein.
       0.785
EFL42138.1
Cytotoxin/hemolysin.
       0.785
nadK
ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.785
EFL42540.1
Conserved hypothetical protein.
  
     0.761
EFL42140.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.699
EFL42141.1
Glycosyl transferase.
 
     0.698
EFL38653.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
     0.667
EFL43071.1
Conserved hypothetical protein.
   
   0.644
EFL40616.1
Secreted protein.
  
     0.612
EFL40045.1
Conserved hypothetical protein.
  
     0.599
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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