Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL42188.1Conserved hypothetical protein. (175 aa)    
Predicted Functional Partners:
EFL42189.1
Secreted protein.
 
     0.882
EFL42190.1
Conserved hypothetical protein.
 
     0.851
EFL42187.1
Serine/threonine protein kinase.
       0.791
EFL41129.1
Secreted protein.
 
     0.744
EFL41229.1
Conserved hypothetical protein.
  
     0.565
EFL39983.1
Conserved hypothetical protein.
  
     0.472
EFL41548.1
Conserved hypothetical protein.
  
     0.450
EFL41717.1
Secreted protein.
  
     0.449
EFL42387.1
Conserved hypothetical protein.
  
     0.445
EFL37593.1
Membrane protein.
  
     0.443
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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