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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42192.1ABC transporter, permease component. (260 aa)    
Predicted Functional Partners:
EFL42193.1
Antibiotic resistance ATP-binding protein.
 
 
 0.968
EFL39475.1
Antibiotic resistance ATP-binding protein.
 
 
 0.869
EFL40016.1
Daunorubicin resistance ATP-binding protein DrrA.
 
 
 0.868
EFL41689.1
Antibiotic resistance ATP-binding protein.
 
 
 0.868
EFL40315.1
Daunorubicin resistance ATP-binding protein DrrA.
 
 
 0.866
EFL37366.1
Daunorubicin resistance ATP-binding protein DrrA.
 
 
 0.865
EFL39897.1
Antibiotic resistance ATP-binding protein.
 
 
 0.855
EFL41657.1
Antibiotic resistance ATP-binding protein.
 
 
 0.855
EFL39896.1
ABC transporter, permease.
 
 
0.853
EFL39071.1
ABC transporter, integral membrane subunit.
  
  
  0.832
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.