Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL42194.1Conserved hypothetical protein; Unextendable partial coding region. (194 aa)    
Predicted Functional Partners:
EFL42195.1
GntR-family transcriptional regulator.
       0.845
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
       0.811
EFL42197.1
Secreted protein.
 
     0.808
EFL40786.1
Conserved hypothetical protein.
  
     0.755
EFL40454.1
Integral membrane protein.
  
     0.745
EFL42198.1
TetR-family transcriptional regulator.
       0.724
EFL39469.1
Regulatory protein.
  
     0.681
EFL42307.1
Transcriptional regulator.
  
     0.674
EFL42202.1
Integral membrane transporter; Unextendable partial coding region.
 
     0.661
EFL40457.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.650
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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