STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42200.1Oxidoreductase, molybdopterin-binding. (473 aa)    
Predicted Functional Partners:
EFL42199.1
Oxidoreductase, molybdopterin-binding.
     0.987
EFL37975.1
Formate dehydrogenase, beta subunit.
   
 0.946
EFL37793.1
Secreted protein.
 
 0.834
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.798
EFL41772.1
Cytochrome C heme-binding subunit.
  
 0.780
EFL43231.1
ferredoxin-NADP reductase.
  
 
 0.771
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.753
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.753
EFL43517.1
Hydrogenase/sulfur reductase, delta subunit.
    
 0.725
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
     
 0.713
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.