Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL42202.1Integral membrane transporter; Unextendable partial coding region. (228 aa)    
Predicted Functional Partners:
EFL42201.1
Citrate transporter.
       0.763
EFL42194.1
Conserved hypothetical protein; Unextendable partial coding region.
 
     0.661
EFL42197.1
Secreted protein.
       0.639
EFL42198.1
TetR-family transcriptional regulator.
       0.639
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
       0.621
EFL42195.1
GntR-family transcriptional regulator.
       0.617
EFL39748.1
Conserved hypothetical protein.
  
     0.565
EFL39064.1
Conserved hypothetical protein.
  
     0.555
EFL42203.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.552
EFL42204.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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