STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42218.1Phosphotransferase. (371 aa)    
Predicted Functional Partners:
EFL42217.1
acyl-CoA dehydrogenase.
  0.997
EFL42219.1
Alcohol dehydrogenase, zinc-dependent.
  
  0.833
EFL43338.1
Fatty oxidation complex, alpha subunit.
 
 0.723
EFL41525.1
L4BD family NADP-dependent oxidoreductase.
 
    0.633
EFL42214.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
    0.633
EFL38461.1
acyl-CoA dehydrogenase.
 
 
  0.623
EFL43385.1
NADPH:quinone reductase.
 
  0.592
EFL42661.1
NADPH:quinone reductase.
 
  0.573
EFL42221.1
NTP pyrophosphohydrolase.
       0.572
EFL38571.1
enoyl-CoA hydratase 1.
 
   0.537
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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