STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42220.1Membrane protein. (130 aa)    
Predicted Functional Partners:
EFL42221.1
NTP pyrophosphohydrolase.
       0.862
EFL42222.1
Conserved hypothetical protein.
       0.725
EFL42223.1
Amino acid permease.
       0.653
EFL42224.1
Reductase.
       0.647
EFL42225.1
Formate dehydrogenase.
       0.647
EFL37660.1
3-ketosteroid-delta-1-dehydrogenase.
       0.552
EFL42218.1
Phosphotransferase.
       0.513
EFL42217.1
acyl-CoA dehydrogenase.
       0.433
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.