STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42240.1Phosphatidylinositol 3- and 4-kinase. (266 aa)    
Predicted Functional Partners:
EFL39601.1
Conserved hypothetical protein.
    
 0.991
EFL39602.1
Conserved hypothetical protein.
    
 0.991
EFL42239.1
Conserved hypothetical protein.
 
    0.970
EFL42238.1
Phosphoglycerate mutase.
 
     0.940
EFL38036.1
Conserved hypothetical protein.
    
 0.933
EFL39448.1
Sel1 repeat superfamily protein.
    
 0.933
EFL40031.1
PE-PGRS family protein.
    
 0.933
EFL42016.1
Conserved hypothetical protein.
    
 0.933
EFL43449.1
Conserved hypothetical protein.
    
 0.933
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
    
   0.921
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.