STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL42243.1GntR family transcriptional regulator. (230 aa)    
Predicted Functional Partners:
EFL38678.1
Transcriptional regulator.
  
  
 0.764
EFL42290.1
GntR-family transcriptional regulator.
  
     0.753
EFL42853.1
GntR family transcriptional regulator.
  
  
 0.720
EFL37748.1
GntR-family regulatory protein.
  
  
 0.714
EFL40181.1
GntR-family transcriptional regulator.
  
  
 0.629
EFL40464.1
GntR-family transcriptional regulator.
  
    0.568
EFL38164.1
Isochorismatase.
    
   0.559
EFL42242.1
Conserved hypothetical protein; Unextendable partial coding region.
       0.549
EFL42244.1
Glycerol-3-phosphate dehydrogenase.
       0.526
EFL42909.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
    0.507
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.