STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL42249.1hAD-superfamily hydrolase subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA. (233 aa)    
Predicted Functional Partners:
EFL37738.1
Conserved hypothetical protein.
  
    0.836
EFL42248.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
    0.766
EFL39617.1
GMP synthase domain-containing protein.
 
 
  0.720
EFL39616.1
GMP synthase.
 
 
  0.717
EFL42247.1
Glycerol operon regulatory protein; Truncated CDS.
       0.680
EFL40561.1
Riboflavin/cytosine deaminase.
    
  0.670
EFL42246.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
   0.649
EFL42244.1
Glycerol-3-phosphate dehydrogenase.
     
 0.635
EFL43082.1
Glycosyl hydrolase, family 65.
 
 
 0.620
EFL38775.1
Riboflavin biosynthesis protein RibF.
     
 0.619
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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