STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL42250.1ABC-type dipeptide/oligopeptide transport system. (535 aa)    
Predicted Functional Partners:
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.967
EFL39313.1
Peptide ABC transporter, permease.
 
  0.925
EFL42811.1
Oligopeptide/dipeptide ABC transporter, permease.
 
  0.925
EFL39319.1
ABC transporter integral membrane protein.
 
  0.920
EFL39317.1
Oligopeptide ABC transporter, permease.
 
  0.919
EFL39314.1
Peptide ABC transporter, permease.
 
  0.915
EFL43421.1
Opine ABC transporter, permease.
 
  0.914
EFL38546.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
  0.911
EFL42812.1
ABC peptide transporter, permease component.
 
  0.910
EFL43422.1
Dipeptide transport system permease DppB.
 
  0.910
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.