Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL39025.1 | EFL41895.1 | SSRG_01829 | SSRG_04699 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Glutamate synthase large subunit. | 0.408 |
EFL39025.1 | EFL42359.1 | SSRG_01829 | SSRG_05163 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Acetyltransferase. | 0.696 |
EFL41232.1 | EFL42359.1 | SSRG_04036 | SSRG_05163 | Alcaligin biosynthesis enzyme. | Acetyltransferase. | 0.579 |
EFL41248.1 | EFL41895.1 | SSRG_04052 | SSRG_04699 | Agmatinase; Belongs to the arginase family. | Glutamate synthase large subunit. | 0.914 |
EFL41248.1 | EFL42359.1 | SSRG_04052 | SSRG_05163 | Agmatinase; Belongs to the arginase family. | Acetyltransferase. | 0.611 |
EFL41895.1 | EFL39025.1 | SSRG_04699 | SSRG_01829 | Glutamate synthase large subunit. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.408 |
EFL41895.1 | EFL41248.1 | SSRG_04699 | SSRG_04052 | Glutamate synthase large subunit. | Agmatinase; Belongs to the arginase family. | 0.914 |
EFL41895.1 | EFL42359.1 | SSRG_04699 | SSRG_05163 | Glutamate synthase large subunit. | Acetyltransferase. | 0.679 |
EFL41903.1 | EFL42359.1 | SSRG_04707 | SSRG_05163 | Alcaligin biosynthesis enzyme. | Acetyltransferase. | 0.628 |
EFL42355.1 | EFL42357.1 | SSRG_05159 | SSRG_05161 | 2-deoxyglucose-6-phosphate phosphatase. | D-methionine ABC transporter, permease. | 0.728 |
EFL42355.1 | EFL42358.1 | SSRG_05159 | SSRG_05162 | 2-deoxyglucose-6-phosphate phosphatase. | ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family. | 0.690 |
EFL42355.1 | EFL42359.1 | SSRG_05159 | SSRG_05163 | 2-deoxyglucose-6-phosphate phosphatase. | Acetyltransferase. | 0.658 |
EFL42355.1 | metN | SSRG_05159 | SSRG_05160 | 2-deoxyglucose-6-phosphate phosphatase. | D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.729 |
EFL42357.1 | EFL42355.1 | SSRG_05161 | SSRG_05159 | D-methionine ABC transporter, permease. | 2-deoxyglucose-6-phosphate phosphatase. | 0.728 |
EFL42357.1 | EFL42358.1 | SSRG_05161 | SSRG_05162 | D-methionine ABC transporter, permease. | ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family. | 0.999 |
EFL42357.1 | EFL42359.1 | SSRG_05161 | SSRG_05163 | D-methionine ABC transporter, permease. | Acetyltransferase. | 0.720 |
EFL42357.1 | EFL42360.1 | SSRG_05161 | SSRG_05164 | D-methionine ABC transporter, permease. | Precorrin-6y C5,15-methyltransferase, subunit CbiE. | 0.415 |
EFL42357.1 | metN | SSRG_05161 | SSRG_05160 | D-methionine ABC transporter, permease. | D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
EFL42358.1 | EFL42355.1 | SSRG_05162 | SSRG_05159 | ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family. | 2-deoxyglucose-6-phosphate phosphatase. | 0.690 |
EFL42358.1 | EFL42357.1 | SSRG_05162 | SSRG_05161 | ABC transporter substrate-binding protein; Belongs to the nlpA lipoprotein family. | D-methionine ABC transporter, permease. | 0.999 |
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