STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL43080.1Glucose-1-phosphate phosphodismutase beta-phosphoglucomutase. (245 aa)    
Predicted Functional Partners:
EFL43082.1
Glycosyl hydrolase, family 65.
 
 0.993
EFL43081.1
Glycoside hydrolase family 65.
 
 0.992
EFL43101.1
Trehalose 6-phosphate phosphorylase (TrePP).
 
 0.989
EFL37738.1
Conserved hypothetical protein.
  
    0.836
EFL43079.1
Phosphoribulokinase/uridine kinase.
       0.726
EFL43083.1
Integral membrane protein.
       0.683
EFL39616.1
GMP synthase.
  
 
  0.679
EFL39617.1
GMP synthase domain-containing protein.
  
 
  0.679
EFL40561.1
Riboflavin/cytosine deaminase.
    
  0.670
EFL43393.1
Hydrolase.
  
   
 0.557
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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