STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61264.1Iron-only hydrogenase maturation rSAM protein HydG; KEGG: hor:Hore_19320 1.5e-104 thiH; thiamine biosynthesis protein ThiH K03150; Psort location: Cytoplasmic, score: 8.96. (482 aa)    
Predicted Functional Partners:
KXB61263.1
Hydrogenase maturation GTPase HydF; KEGG: ccb:Clocel_4383 7.7e-19 tRNA modification GTPase TrmE; K03650 tRNA modification GTPase; Psort location: Cytoplasmic, score: 9.12.
   
 0.993
KXB61266.1
Putative iron-only hydrogenase system regulator.
 
   
 0.952
KXB61265.1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: cce:Ccel_3189 7.9e-113 biotin synthase; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 8.96.
 
   
0.900
KXB56854.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.855
KXB60089.1
Putative ferredoxin hydrogenase; KEGG: scc:Spico_0354 3.2e-187 hydrogenase, Fe-only; K00336 NADH-quinone oxidoreductase subunit G.
 
   
 0.781
KXB58062.1
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
     
 0.638
purC
KEGG: csh:Closa_1577 4.6e-101 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: Cytoplasmic, score: 9.97; Belongs to the SAICAR synthetase family.
    
 0.589
KXB59985.1
KEGG: csh:Closa_1348 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.94.
     
 0.537
KXB61267.1
Peptidase propeptide and YPEB domain protein.
       0.424
KXB61268.1
Sigma-70 region 2; KEGG: acl:ACL_0425 9.2e-16 ECF subfamily RNA polymerase sigma-70 factor K03088; Psort location: CytoplasmicMembrane, score: 7.88.
       0.424
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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