STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB61267.1Peptidase propeptide and YPEB domain protein. (372 aa)    
Predicted Functional Partners:
KXB61268.1
Sigma-70 region 2; KEGG: acl:ACL_0425 9.2e-16 ECF subfamily RNA polymerase sigma-70 factor K03088; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.906
KXB58070.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 8.4e-13 cell wall hydrolase/autolysin K01448.
  
     0.697
KXB61176.1
Cell wall-binding repeat protein.
  
     0.670
KXB56684.1
Cell wall-binding repeat protein; KEGG: sor:SOR_1423 1.4e-11 cell wall hydrolase/autolysin K01448.
  
     0.670
KXB55570.1
Hypothetical protein; KEGG: stu:STH8232_1700 3.1e-16 brp/Blh family beta-carotene 15,15-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.656
KXB53516.1
KEGG: ere:EUBREC_0966 3.3e-82 N-acetylmuramoyl-L-alanine amidase domain protein; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.64.
  
     0.614
KXB52632.1
Cell wall-binding repeat protein; KEGG: lme:LEUM_0857 2.1e-17 glycosyl hydrolase; K00689 dextransucrase.
  
     0.596
KXB53161.1
Repeat protein; KEGG: cbe:Cbei_3870 6.1e-15 glycosyl hydrolase family 32 protein; K03332 fructan beta-fructosidase.
  
     0.567
KXB61269.1
KEGG: rlt:Rleg2_4805 4.8e-19 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.563
KXB59160.1
KEGG: lrf:LAR_1431 0.0080 hypothetical protein; K14205 phosphatidylglycerol lysyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.553
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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